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In this section

Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Overall Summary

Legend
Internal nodes (ancestral taxa) Node types Speciations Duplications Dubious nodes
Leaves (extant species) Gene tree coverage Genes in multi-species trees Genes in single-species trees Orphaned genes
Gene QC Validated genes Short genes Long genes Split genes
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Homarus americanus strain GMGI-L3
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Homarus gammarus reference strain
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Procambarus clarkii isolate CNS0578487
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Portunus trituberculatus strain SZX2019
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Penaeus chinensis
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Penaeus japonicus strain Ginoza2017
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Penaeus monodon strain SGIC_2016
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Penaeus vannamei isolate JL-2024
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Hyalella azteca isolate HAZT.00-mixed
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Lepeophtheirus salmonis
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Tigriopus californicus strain San Diego
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Eurytemora carolleeae
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Amphibalanus amphitrite strain SeventyFive
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Pollicipes pollicipes isolate AB1234
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Daphnia magna strain NIES
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Daphnia pulex strain KAP4
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Daphnia pulicaria strain SC F1-1A
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Anopheles darlingi
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Drosophila melanogaster
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Cydia pomonella isolate Wapato2018A
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Spodoptera frugiperda strain SF20-4
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Apis dorsata
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Tribolium madens strain multiple individuals
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Halyomorpha halys isolate HHAL.00
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Strigamia maritima
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Ixodes scapularis strain PalLabHiFi
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Limulus polyphemus
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Hypsibius exemplaris strain Z151
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Paramacrobiotus metropolitanus strain TYO
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Caenorhabditis elegans strain N2
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Loa loa strain Cameroon SouthWest Province isolate
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Gordionus sp. m RMFG-2023
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Priapulus caudatus
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Haliotis rubra strain DU_JTF1
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Haliotis rufescens strain VD_foot
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Biomphalaria glabrata
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Gigantopelta aegis strain Gae_Host
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Lottia gigantea
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Magallana gigas
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Mizuhopecten yessoensis strain PY_sf001
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Octopus bimaculoides strain UCB-OBI-ISO-001
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Dimorphilus gyrociliatus
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Owenia fusiformis
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Helobdella robusta
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Echinococcus granulosus
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Schistosoma mansoni
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Lineus longissimus reference strain
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Lingula anatina strain Amm_Jpn
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Pomphorhynchus laevis strain GPI110
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Adineta vaga
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Lytechinus pictus isolate F3 Inbred
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Lytechinus variegatus strain NC3
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Strongylocentrotus purpuratus strain Spur 01
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Acanthaster planci
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Asterias rubens
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Anneissia japonica strain Jap-2015-1
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Branchiostoma lanceolatum
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Saccoglossus kowalevskii
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Hofstenia miamia strain MS-H3
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Acropora millepora strain JS-1
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Stylophora pistillata isolate CSM Monaco
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Orbicella faveolata strain FL
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Actinia equina strain AE1
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Exaiptasia diaphana strain CC7
-
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Nematostella vectensis
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Dendronephthya gigantea strain DGI-Jeju-01
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Clytia hemisphaerica strain Z4C2
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Hydra vulgaris
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Thelohanellus kitauei
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Mnemiopsis leidyi
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Trichoplax adhaerens strain Grell-BS-1999
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Amphimedon queenslandica
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Halichondria panicea